single-cell-rna-qc
Automated single-cell RNA-seq quality control pipeline following scverse best practices. Performs MAD-based outlier detection, cell filtering, and diagnostic visualization for .h5ad and .h5 datasets.
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135 skills found
Automated single-cell RNA-seq quality control pipeline following scverse best practices. Performs MAD-based outlier detection, cell filtering, and diagnostic visualization for .h5ad and .h5 datasets.
Writes, executes, and refines SQL queries, from basic selects to complex multi-table joins, aggregations, and subqueries for data retrieval and reporting.
A rigorous, four-phase methodology to enforce systematic root cause analysis before applying any code fixes.
Implement LlamaExtract for robust structured data extraction from PDF, DOCX, and PPTX files using Pydantic schemas.
Preprocessing and cleaning astronomical light curves using Lightkurve. Tools for outlier removal, flattening, trend detrending, and quality flag handling for time-series analysis.
High-performance document intelligence library for extracting text, tables, code, and metadata from 91+ file formats, with OCR and LLM-ready output.
Transit Least Squares (TLS) algorithm for detecting exoplanet transits in light curve data, offering higher sensitivity than Lomb-Scargle for transit-shaped signals.
Guide for implementing a new AI coding agent analyzer in Splitrail to track token usage, costs, and performance metrics.
Validates Excel exports for Customer Feedback Analyzer with 7 specific view sheets, 36 columns, and precise color-coded formatting. Ensures zero errors in customer-facing deliverables.
Extracts Supabase anonymous API keys from client-side source code to facilitate RLS testing and security auditing.
Create, alter, and validate Snowflake semantic views using the Snowflake CLI.
Build and orchestrate end-to-end MLOps pipelines covering data preparation, training, validation, and automated deployment.